• #Nematode
• #Phenotyping
• #Neuron
• #Brain Segmentation
• #Multi-Modality
• #Instance Segmentation
• #Pixel Embedding
• #Weakly-Supervised
• #Distance Regression
• #Semi-Supervised
• #Shape Prior
• #Segmentation
• #Image-label Supervised
• #Evaluation Metric
• #Annotation
• #Image Augmentation
• #Machine Learnig

Nematode

• PheNeSens: Phenotyping of Nematodes with Sensors
• Instance Segmentation of Nematode Cysts in Microscopic Images of Soil Samples
• A CNN Framework Based on Line Annotations for Detecting Nematodes in Microscopic Images
• High-throughput phenotyping of nematode cysts

Phenotyping

• PheNeSens: Phenotyping of Nematodes with Sensors

Neuron

• NeuronSeg: Neuron Analysis in Calcium Images

Brain Segmentation

• MixNet Multi-modality Mix Network for Brain Segmentation

Multi-Modality

• MixNet Multi-modality Mix Network for Brain Segmentation

Instance Segmentation

• Instance Segmentation of Nematode Cysts in Microscopic Images of Soil Samples
• Instance Segmentation of Biomedical Images with an Object-aware Embedding Learned with Local Constraints
• A CNN Framework Based on Line Annotations for Detecting Nematodes in Microscopic Images
• Improving Pixel Embedding Learning through Intermediate Distance Regression Supervision
• Semi-supervised Instance Segmentation with a Learned Shape Prior
• High-throughput phenotyping of nematode cysts
• Instance Segmentation of Dense and Overlapping Objects via Layering
• SortedAP: Rethinking evaluation metrics for instance segmentation

Pixel Embedding

• Instance Segmentation of Biomedical Images with an Object-aware Embedding Learned with Local Constraints
• Improving Pixel Embedding Learning through Intermediate Distance Regression Supervision
• Instance Segmentation of Dense and Overlapping Objects via Layering

Weakly-Supervised

• A CNN Framework Based on Line Annotations for Detecting Nematodes in Microscopic Images

Distance Regression

• Improving Pixel Embedding Learning through Intermediate Distance Regression Supervision

Semi-Supervised

• Semi-supervised Instance Segmentation with a Learned Shape Prior
• Learning to Segment Fine Structures Under Image-Level Supervision With an Application to Nematode Segmentation

Shape Prior

• Semi-supervised Instance Segmentation with a Learned Shape Prior

Segmentation

• Learning to Segment Fine Structures Under Image-Level Supervision With an Application to Nematode Segmentation

Image-label Supervised

• Learning to Segment Fine Structures Under Image-Level Supervision With an Application to Nematode Segmentation

Evaluation Metric

• SortedAP: Rethinking evaluation metrics for instance segmentation

Annotation

• IMANNO: IMage ANNOtation Toolkot

Image Augmentation

• tfAugment: Image Augmentation for Tensorflow

Machine Learnig

• tfAugment: Image Augmentation for Tensorflow